{
  "_id": "6a104b18acfb0bcc41c9fd82",
  "Package": "ClinicalUtilityRecal",
  "Type": "Package",
  "Title": "Recalibration Methods for Improved Clinical Utility of Risk\nScores",
  "Version": "0.1.0",
  "Author": "Anu Mishra",
  "Maintainer": "Anu Mishra <anmishra@uw.edu>",
  "Description": "Recalibrate risk scores (predicting binary outcomes) to\nimprove clinical utility of risk score using weighted logistic\nor constrained logistic recalibration methods. Additionally,\nproduces plots to assess the potential for recalibration to\nimprove the clinical utility of a risk model. Methods are\ndescribed in detail in Mishra, A. (2019) \"Methods for Risk\nMarkers that Incorporate Clinical Utility\"\n<http://hdl.handle.net/1773/44068>.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-10 08:01:40 UTC",
    "User": "root"
  },
  "Config/pak/sysreqs": "cmake libicu-dev",
  "Repository": "https://anumishra.r-universe.dev",
  "Date/Publication": "2020-04-15 10:10:02 UTC",
  "RemoteUrl": "https://github.com/cran/ClinicalUtilityRecal",
  "RemoteRef": "HEAD",
  "RemoteSha": "c3bc634a596fab70462193a531c28420d27ac7a6",
  "MD5sum": "0335476cbf60d8b9b076bb972b8c09be",
  "_user": "anumishra",
  "_type": "src",
  "_file": "ClinicalUtilityRecal_0.1.0.tar.gz",
  "_fileid": "69dcdf93965fac960ba1481ae01f54351c6f4eee786109a51be0fcf4ddc8ae33",
  "_filesize": 205862,
  "_sha256": "69dcdf93965fac960ba1481ae01f54351c6f4eee786109a51be0fcf4ddc8ae33",
  "_created": "2026-05-10T08:01:40.000Z",
  "_published": "2026-05-22T12:24:56.540Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77378734438,
      "time": 163,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6902166325"
    },
    {
      "job": 77378734830,
      "time": 156,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6902165727"
    },
    {
      "job": 77378734564,
      "time": 161,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6902163346"
    },
    {
      "job": 77378734594,
      "time": 138,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6902162263"
    },
    {
      "job": 77378734117,
      "time": 184,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6902150347"
    },
    {
      "job": 77378733983,
      "time": 133,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7160400822"
    },
    {
      "job": 77378734407,
      "time": 122,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6902162547"
    },
    {
      "job": 77378734881,
      "time": 115,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6902161917"
    },
    {
      "job": 77378734510,
      "time": 119,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6902162179"
    }
  ],
  "_buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/ClinicalUtilityRecal",
  "_commit": {
    "id": "c3bc634a596fab70462193a531c28420d27ac7a6",
    "author": "Anu Mishra <anmishra@uw.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.0\n",
    "time": 1586945402
  },
  "_maintainer": {
    "name": "Anu Mishra",
    "email": "anmishra@uw.edu",
    "login": "anumishra",
    "uuid": 9167208
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "lattice",
      "role": "Imports"
    },
    {
      "package": "caret",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "cowplot",
      "role": "Imports"
    },
    {
      "package": "nloptr",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "anumishra",
      "count": 1,
      "uuid": 9167208
    }
  ],
  "_userbio": {
    "uuid": 9167208,
    "type": "user",
    "name": "anumishra"
  },
  "_downloads": {
    "count": 226,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ClinicalUtilityRecal"
  },
  "_searchresults": 2,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/ClinicalUtilityRecal.html",
    "extra/contents.json",
    "manual.pdf"
  ],
  "_realowner": "anumishra",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2020-04-15"
    }
  ],
  "_exports": [
    "calCurvPlot",
    "calWt",
    "constRecal",
    "cvRepWtTuning",
    "cvWtTuning",
    "nb",
    "RAWgrid",
    "snbRecalPlot",
    "stdRecal",
    "wtRecal"
  ],
  "_datasets": [
    {
      "name": "fakeData",
      "title": "Dataset for Recalibration Purposes",
      "object": "fakeData",
      "class": [
        "data.frame"
      ],
      "fields": [
        "p",
        "y"
      ],
      "rows": 1000,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "calCurvPlot",
      "title": "Calibration Curve Plot",
      "topics": [
        "calCurvPlot"
      ]
    },
    {
      "page": "calWt",
      "title": "Calibration Weights",
      "topics": [
        "calWt"
      ]
    },
    {
      "page": "constRecal",
      "title": "Constrained Logistic Recalibration",
      "topics": [
        "constRecal"
      ]
    },
    {
      "page": "cvReptWtTuning",
      "title": "Repeated Cross Validation for Weight Tuning Parameter Selection",
      "topics": [
        "cvRepWtTuning"
      ]
    },
    {
      "page": "cvWtTuning",
      "title": "Cross-validation for Selecting Weight Tuning Parameter",
      "topics": [
        "cvWtTuning"
      ]
    },
    {
      "page": "fakeData",
      "title": "Dataset for Recalibration Purposes",
      "topics": [
        "fakeData"
      ]
    },
    {
      "page": "nb",
      "title": "Net Benefit",
      "topics": [
        "nb"
      ]
    },
    {
      "page": "RAWgrid",
      "title": "RAW grid for Cross Validation",
      "topics": [
        "RAWgrid"
      ]
    },
    {
      "page": "snbRecalPlot",
      "title": "Plot of Potential sNB Under Recalibration",
      "topics": [
        "snbRecalPlot"
      ]
    },
    {
      "page": "stdRecal",
      "title": "Standard Logistic Recalibration",
      "topics": [
        "stdRecal"
      ]
    },
    {
      "page": "wtRecal",
      "title": "Weighted Logistic Recalibration",
      "topics": [
        "wtRecal"
      ]
    }
  ],
  "_rundeps": [
    "caret",
    "class",
    "cli",
    "clock",
    "codetools",
    "cowplot",
    "cpp11",
    "data.table",
    "diagram",
    "digest",
    "dplyr",
    "e1071",
    "farver",
    "foreach",
    "future",
    "future.apply",
    "generics",
    "ggplot2",
    "globals",
    "glue",
    "gower",
    "gtable",
    "hardhat",
    "ipred",
    "isoband",
    "iterators",
    "KernSmooth",
    "labeling",
    "lattice",
    "lava",
    "lifecycle",
    "listenv",
    "lubridate",
    "magrittr",
    "MASS",
    "Matrix",
    "ModelMetrics",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "parallelly",
    "pillar",
    "pkgconfig",
    "plyr",
    "pROC",
    "prodlim",
    "progressr",
    "proxy",
    "purrr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "recipes",
    "reshape2",
    "rlang",
    "rpart",
    "S7",
    "scales",
    "shape",
    "sparsevctrs",
    "SQUAREM",
    "stringi",
    "stringr",
    "survival",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "timeDate",
    "tzdb",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "clinicalutilityrecal",
  "_universes": [
    "anumishra"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-10T08:03:54.000Z",
      "distro": "noble",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "0fa61cb46966b4ca45f2214a1d06cf38dddf034a80bb12486ef28f1964f3111f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-10T08:03:50.000Z",
      "distro": "noble",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "ea950f62d769a399ee7ed6a0cecc0bee786cf6a5a9e53aa4ad9dea6adcc32bb5",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-10T08:03:43.000Z",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "03016d3e9acbc1a92d75a5391c7c87d8e7dd97a048f186b818dbdfdb8a6bdbb6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-10T08:03:29.000Z",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "1ecb1ff4bc91508177afed3fad366ce12f059cd5e3abcb14f2348919651b623f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-10T08:03:06.000Z",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "26397328b24ffa0c1ddbfc44a2cf9a2137736f754de64ed813895938e813815d",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-10T08:02:59.000Z",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "b3e1bee8575c5251daf06e25dd324762f8ef9b2980e7e0bb77d6dc8229dfff55",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-10T08:03:02.000Z",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "938f66bd368f3992df455f46d79c36c4a1d3edaffaa11e6b3db5d8926c086122",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-05-22T12:24:39.000Z",
      "commit": "c3bc634a596fab70462193a531c28420d27ac7a6",
      "fileid": "b433ab5b75598a493321d01a5daa6023859ce19d4cffd593ce1041c3cfed8ef8",
      "status": "success",
      "buildurl": "https://github.com/r-universe/anumishra/actions/runs/25623482153"
    }
  ]
}